Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm31256-201ENSMUST00000194705 506 ntBASIC13.78□□□□□ -0.2
CiitaP79621 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.78□□□□□ -0.2
CiitaP79621 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CiitaP79621 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CiitaP79621 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CiitaP79621 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CiitaP79621 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CiitaP79621 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.78□□□□□ -0.2
CiitaP79621 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CiitaP79621 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CiitaP79621 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
CiitaP79621 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CiitaP79621 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.77□□□□□ -0.21
CiitaP79621 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.77□□□□□ -0.21
CiitaP79621 Gm11597-201ENSMUST00000121423 964 ntBASIC13.77□□□□□ -0.21
CiitaP79621 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.77□□□□□ -0.21
CiitaP79621 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Gm8885-201ENSMUST00000189382 598 ntBASIC13.77□□□□□ -0.21
CiitaP79621 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.77□□□□□ -0.21
CiitaP79621 Gm37201-201ENSMUST00000191845 523 ntBASIC13.77□□□□□ -0.21
CiitaP79621 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.77□□□□□ -0.21
CiitaP79621 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.77□□□□□ -0.21
CiitaP79621 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.77□□□□□ -0.21
CiitaP79621 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
CiitaP79621 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.77□□□□□ -0.21
CiitaP79621 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CiitaP79621 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CiitaP79621 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Gm11930-201ENSMUST00000117788 190 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Gm12314-201ENSMUST00000118104 538 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.76□□□□□ -0.21
CiitaP79621 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.76□□□□□ -0.21
CiitaP79621 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.76□□□□□ -0.21
CiitaP79621 Gm39404-201ENSMUST00000216350 313 ntBASIC13.76□□□□□ -0.21
CiitaP79621 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CiitaP79621 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.76□□□□□ -0.21
CiitaP79621 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CiitaP79621 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.76□□□□□ -0.21
CiitaP79621 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms