Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cux2P70298 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cux2P70298 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC20.4■□□□□ 0.86
Cux2P70298 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC20.4■□□□□ 0.86
Cux2P70298 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Cux2P70298 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Cux2P70298 AC122314.1-201ENSMUST00000223056 2239 ntBASIC20.4■□□□□ 0.86
Cux2P70298 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC20.4■□□□□ 0.86
Cux2P70298 Gm24398-201ENSMUST00000157870 109 ntBASIC20.4■□□□□ 0.86
Cux2P70298 Gm26989-201ENSMUST00000182608 749 ntBASIC20.4■□□□□ 0.86
Cux2P70298 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC20.4■□□□□ 0.86
Cux2P70298 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC20.4■□□□□ 0.86
Cux2P70298 Gm23680-201ENSMUST00000083162 164 ntBASIC20.4■□□□□ 0.86
Cux2P70298 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Cux2P70298 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cux2P70298 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cux2P70298 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cux2P70298 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cux2P70298 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Cux2P70298 Gm14274-201ENSMUST00000117182 615 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC20.39■□□□□ 0.85
Cux2P70298 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC20.39■□□□□ 0.85
Cux2P70298 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cux2P70298 Gm45410-201ENSMUST00000211331 1093 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Gm5805-201ENSMUST00000072779 456 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Gm8617-201ENSMUST00000118796 2222 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC20.39■□□□□ 0.85
Cux2P70298 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cux2P70298 Gm43858-201ENSMUST00000199418 1778 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Gm43056-201ENSMUST00000197865 2791 ntBASIC20.39■□□□□ 0.85
Cux2P70298 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC20.38■□□□□ 0.85
Cux2P70298 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cux2P70298 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cux2P70298 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC20.38■□□□□ 0.85
Cux2P70298 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Cux2P70298 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC20.38■□□□□ 0.85
Cux2P70298 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Gm5434-202ENSMUST00000222384 1451 ntBASIC20.38■□□□□ 0.85
Cux2P70298 Gm5434-201ENSMUST00000071825 1451 ntBASIC20.38■□□□□ 0.85
Cux2P70298 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cux2P70298 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cux2P70298 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Gm4310-201ENSMUST00000177847 889 ntBASIC20.37■□□□□ 0.85
Cux2P70298 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC20.37■□□□□ 0.85
Cux2P70298 Gm12407-201ENSMUST00000180219 324 ntBASIC20.37■□□□□ 0.85
Cux2P70298 Gm3017-201ENSMUST00000203603 1126 ntBASIC20.37■□□□□ 0.85
Cux2P70298 CT009536.2-201ENSMUST00000225370 665 ntBASIC20.37■□□□□ 0.85
Cux2P70298 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.37■□□□□ 0.85
Cux2P70298 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Cux2P70298 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Cux2P70298 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cux2P70298 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Cux2P70298 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms