Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.93□□□□□ -0.5
Six5P70178 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.93□□□□□ -0.5
Six5P70178 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Snora78-201ENSMUST00000158630 128 ntBASIC11.93□□□□□ -0.5
Six5P70178 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.93□□□□□ -0.5
Six5P70178 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.93□□□□□ -0.5
Six5P70178 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Six5P70178 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Gm24526-201ENSMUST00000082921 158 ntBASIC11.93□□□□□ -0.5
Six5P70178 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Six5P70178 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Six5P70178 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Six5P70178 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Six5P70178 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.92□□□□□ -0.5
Six5P70178 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.92□□□□□ -0.5
Six5P70178 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Gm13492-201ENSMUST00000119772 665 ntBASIC11.92□□□□□ -0.5
Six5P70178 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.92□□□□□ -0.5
Six5P70178 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.92□□□□□ -0.5
Six5P70178 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Snora73a-201ENSMUST00000082453 205 ntBASIC11.92□□□□□ -0.5
Six5P70178 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Six5P70178 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.92□□□□□ -0.5
Six5P70178 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Six5P70178 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Six5P70178 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.92□□□□□ -0.5
Six5P70178 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Six5P70178 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.92□□□□□ -0.5
Six5P70178 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Six5P70178 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.91□□□□□ -0.5
Six5P70178 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Six5P70178 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Six5P70178 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Six5P70178 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Six5P70178 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Six5P70178 Gm16379-201ENSMUST00000161469 348 ntBASIC11.91□□□□□ -0.5
Six5P70178 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.91□□□□□ -0.5
Six5P70178 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.91□□□□□ -0.5
Six5P70178 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Six5P70178 Gm8762-201ENSMUST00000193486 339 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms