Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SmoP56726 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Gm25214-201ENSMUST00000104573 129 ntBASIC12.78□□□□□ -0.36
SmoP56726 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.78□□□□□ -0.36
SmoP56726 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.78□□□□□ -0.36
SmoP56726 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.78□□□□□ -0.36
SmoP56726 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.78□□□□□ -0.36
SmoP56726 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.78□□□□□ -0.36
SmoP56726 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.78□□□□□ -0.36
SmoP56726 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.78□□□□□ -0.36
SmoP56726 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.78□□□□□ -0.36
SmoP56726 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
SmoP56726 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SmoP56726 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
SmoP56726 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SmoP56726 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.77□□□□□ -0.36
SmoP56726 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SmoP56726 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SmoP56726 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SmoP56726 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SmoP56726 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.77□□□□□ -0.36
SmoP56726 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
SmoP56726 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.77□□□□□ -0.36
SmoP56726 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SmoP56726 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Gm13315-201ENSMUST00000120376 991 ntBASIC12.77□□□□□ -0.37
SmoP56726 Gm14726-201ENSMUST00000120623 896 ntBASIC12.77□□□□□ -0.37
SmoP56726 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.77□□□□□ -0.37
SmoP56726 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.77□□□□□ -0.37
SmoP56726 Gm26956-201ENSMUST00000182176 986 ntBASIC12.77□□□□□ -0.37
SmoP56726 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.77□□□□□ -0.37
SmoP56726 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.77□□□□□ -0.37
SmoP56726 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.77□□□□□ -0.37
SmoP56726 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SmoP56726 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SmoP56726 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SmoP56726 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SmoP56726 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SmoP56726 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.77□□□□□ -0.37
SmoP56726 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.76□□□□□ -0.37
SmoP56726 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.76□□□□□ -0.37
SmoP56726 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SmoP56726 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.76□□□□□ -0.37
SmoP56726 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SmoP56726 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SmoP56726 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms