Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Gm8805-201ENSMUST00000117848 313 ntBASIC12.73□□□□□ -0.37
Fdft1P53798 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Gm8810-201ENSMUST00000172895 754 ntBASIC12.73□□□□□ -0.37
Fdft1P53798 Gm27892-201ENSMUST00000185017 106 ntBASIC12.73□□□□□ -0.37
Fdft1P53798 Gm28693-202ENSMUST00000190758 331 ntBASIC12.73□□□□□ -0.37
Fdft1P53798 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Gm17794-201ENSMUST00000220252 955 ntBASIC12.73□□□□□ -0.37
Fdft1P53798 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Fdft1P53798 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.73□□□□□ -0.37
Fdft1P53798 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Fdft1P53798 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Gm8213-201ENSMUST00000118191 441 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Gm11803-201ENSMUST00000119966 444 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Gm15806-201ENSMUST00000120696 955 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Gm10156-201ENSMUST00000122364 462 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.72□□□□□ -0.37
Fdft1P53798 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 Gm9002-201ENSMUST00000178437 499 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.72□□□□□ -0.37
Fdft1P53798 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.72□□□□□ -0.37
Fdft1P53798 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Fdft1P53798 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Fdft1P53798 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Fdft1P53798 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.71□□□□□ -0.37
Fdft1P53798 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.71□□□□□ -0.37
Fdft1P53798 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.71□□□□□ -0.37
Fdft1P53798 Gm13123-201ENSMUST00000122173 492 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.71□□□□□ -0.37
Fdft1P53798 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Fdft1P53798 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Fdft1P53798 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms