Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.14□□□□□ -0.63
Cxcl5P50228 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.14□□□□□ -0.63
Cxcl5P50228 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.14□□□□□ -0.63
Cxcl5P50228 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.14□□□□□ -0.63
Cxcl5P50228 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cxcl5P50228 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Mir874-201ENSMUST00000104769 76 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Cxcl5P50228 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.13□□□□□ -0.63
Cxcl5P50228 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cxcl5P50228 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.12□□□□□ -0.63
Cxcl5P50228 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.12□□□□□ -0.63
Cxcl5P50228 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.12□□□□□ -0.63
Cxcl5P50228 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm10576-201ENSMUST00000191927 825 ntBASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.12□□□□□ -0.63
Cxcl5P50228 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl5P50228 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cxcl5P50228 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms