Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdx2P43241 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdx2P43241 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Cdx2P43241 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cdx2P43241 Gm15711-201ENSMUST00000118889 535 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 Gm12380-201ENSMUST00000119012 544 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Cdx2P43241 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.07□□□□□ -0.48
Cdx2P43241 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdx2P43241 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdx2P43241 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdx2P43241 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdx2P43241 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm23949-201ENSMUST00000104027 127 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 Gm12314-201ENSMUST00000118104 538 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 Gm15782-201ENSMUST00000121073 445 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 AY036118-201ENSMUST00000200021 923 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 Gm9555-201ENSMUST00000200908 583 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.06□□□□□ -0.48
Cdx2P43241 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdx2P43241 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Cdx2P43241 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdx2P43241 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Cdx2P43241 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdx2P43241 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Cdx2P43241 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms