Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl12P40224 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.04□□□□□ -0.32
Cxcl12P40224 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm807-202ENSMUST00000224929 408 ntBASIC13.04□□□□□ -0.32
Cxcl12P40224 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm26448-201ENSMUST00000082446 203 ntBASIC13.04□□□□□ -0.32
Cxcl12P40224 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.04□□□□□ -0.32
Cxcl12P40224 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl12P40224 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl12P40224 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.03□□□□□ -0.32
Cxcl12P40224 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Gm43184-201ENSMUST00000197247 542 ntBASIC13.03□□□□□ -0.32
Cxcl12P40224 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.03□□□□□ -0.32
Cxcl12P40224 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl12P40224 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl12P40224 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl12P40224 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl12P40224 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl12P40224 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.02□□□□□ -0.32
Cxcl12P40224 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl12P40224 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cxcl12P40224 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cxcl12P40224 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cxcl12P40224 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl12P40224 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.02□□□□□ -0.33
Cxcl12P40224 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms