Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Mir326-201ENSMUST00000083637 95 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Chd1P40201 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chd1P40201 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Chd1P40201 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Gm42769-201ENSMUST00000198576 1659 ntBASIC18.63■□□□□ 0.57
Chd1P40201 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Chd1P40201 Gm6655-201ENSMUST00000201932 1309 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Gm8899-201ENSMUST00000214635 1332 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Gm5909-201ENSMUST00000119768 1281 ntBASIC18.63■□□□□ 0.57
Chd1P40201 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chd1P40201 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Chd1P40201 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Chd1P40201 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC18.62■□□□□ 0.57
Chd1P40201 Gm23675-201ENSMUST00000157311 125 ntBASIC18.62■□□□□ 0.57
Chd1P40201 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC18.62■□□□□ 0.57
Chd1P40201 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC18.62■□□□□ 0.57
Chd1P40201 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC18.62■□□□□ 0.57
Chd1P40201 Gm45085-201ENSMUST00000209100 441 ntBASIC18.62■□□□□ 0.57
Chd1P40201 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC18.62■□□□□ 0.57
Chd1P40201 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Chd1P40201 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC18.62■□□□□ 0.57
Chd1P40201 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Chd1P40201 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Chd1P40201 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd1P40201 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Chd1P40201 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Gm21358-201ENSMUST00000191645 1659 ntBASIC18.61■□□□□ 0.57
Chd1P40201 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC18.61■□□□□ 0.57
Chd1P40201 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC18.61■□□□□ 0.57
Chd1P40201 Gm11244-201ENSMUST00000121243 237 ntBASIC18.61■□□□□ 0.57
Chd1P40201 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC18.61■□□□□ 0.57
Chd1P40201 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC18.61■□□□□ 0.57
Chd1P40201 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC18.61■□□□□ 0.57
Chd1P40201 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chd1P40201 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Chd1P40201 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Chd1P40201 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Chd1P40201 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Gm28833-201ENSMUST00000189671 559 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm42430-201ENSMUST00000197209 616 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 AC138716.2-201ENSMUST00000226670 1016 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Chd1P40201 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Gm18782-201ENSMUST00000209023 1399 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Gm12712-201ENSMUST00000120676 801 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Gm8451-201ENSMUST00000170338 447 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Gm7504-201ENSMUST00000201449 424 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm43852-201ENSMUST00000202098 917 ntBASIC18.6■□□□□ 0.57
Chd1P40201 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Gm7536-201ENSMUST00000077389 444 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Gm5453-201ENSMUST00000080866 447 ntBASIC18.6■□□□□ 0.57
Chd1P40201 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Chd1P40201 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Chd1P40201 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Chd1P40201 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms