Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Fen1P39749 Gm7730-201ENSMUST00000212486 454 ntBASIC12.83□□□□□ -0.36
Fen1P39749 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Fen1P39749 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Fen1P39749 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Fen1P39749 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.82□□□□□ -0.36
Fen1P39749 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.82□□□□□ -0.36
Fen1P39749 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.82□□□□□ -0.36
Fen1P39749 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fen1P39749 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fen1P39749 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fen1P39749 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.82□□□□□ -0.36
Fen1P39749 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.82□□□□□ -0.36
Fen1P39749 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Fen1P39749 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Fen1P39749 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.82□□□□□ -0.36
Fen1P39749 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fen1P39749 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Fen1P39749 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Fen1P39749 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.81□□□□□ -0.36
Fen1P39749 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.81□□□□□ -0.36
Fen1P39749 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.81□□□□□ -0.36
Fen1P39749 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Fen1P39749 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.81□□□□□ -0.36
Fen1P39749 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.81□□□□□ -0.36
Fen1P39749 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.81□□□□□ -0.36
Fen1P39749 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.81□□□□□ -0.36
Fen1P39749 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Fen1P39749 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.81□□□□□ -0.36
Fen1P39749 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Fen1P39749 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Fen1P39749 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Fen1P39749 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Fen1P39749 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Fen1P39749 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.8□□□□□ -0.36
Fen1P39749 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Fen1P39749 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms