Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Ccl6P27784 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Gm9061-201ENSMUST00000182707 1006 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Gm27847-201ENSMUST00000183711 107 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Gm27375-201ENSMUST00000183799 107 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Gm37922-201ENSMUST00000195596 455 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.92□□□□□ -0.82
Ccl6P27784 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Gm10146-201ENSMUST00000072739 309 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Gm10012-201ENSMUST00000078252 192 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Ccl6P27784 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.92□□□□□ -0.82
Ccl6P27784 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ccl6P27784 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ccl6P27784 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.91□□□□□ -0.82
Ccl6P27784 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Gm8213-201ENSMUST00000118191 441 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Gm6091-201ENSMUST00000098307 165 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.91□□□□□ -0.82
Ccl6P27784 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Ccl6P27784 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ccl6P27784 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Ccl6P27784 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.9□□□□□ -0.82
Ccl6P27784 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ccl6P27784 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms