Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm19931-201ENSMUST00000198920 368 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.8□□□□□ -0.52
Cd40lgP27548 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
Cd40lgP27548 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cd40lgP27548 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.79□□□□□ -0.52
Cd40lgP27548 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.79□□□□□ -0.52
Cd40lgP27548 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.79□□□□□ -0.52
Cd40lgP27548 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Cd40lgP27548 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.79□□□□□ -0.52
Cd40lgP27548 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.79□□□□□ -0.52
Cd40lgP27548 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cd40lgP27548 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cd40lgP27548 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
Cd40lgP27548 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm13226-201ENSMUST00000117838 404 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm4271-201ENSMUST00000174444 973 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm29127-201ENSMUST00000188304 517 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 AY702102-202ENSMUST00000194651 1173 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm37497-201ENSMUST00000195830 798 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Cd40lgP27548 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.78□□□□□ -0.52
Cd40lgP27548 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cd40lgP27548 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms