Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
BdnfP21237 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
BdnfP21237 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
BdnfP21237 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.23□□□□□ -0.45
BdnfP21237 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.23□□□□□ -0.45
BdnfP21237 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Gm15371-201ENSMUST00000117057 784 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Gm11978-201ENSMUST00000122315 466 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.23□□□□□ -0.45
BdnfP21237 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.23□□□□□ -0.45
BdnfP21237 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.23□□□□□ -0.45
BdnfP21237 Gm27437-201ENSMUST00000183429 107 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Mir7654-201ENSMUST00000185082 70 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Gm10576-201ENSMUST00000191927 825 ntBASIC12.23□□□□□ -0.45
BdnfP21237 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.23□□□□□ -0.45
BdnfP21237 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm6983-201ENSMUST00000214912 628 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.23□□□□□ -0.45
BdnfP21237 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.23□□□□□ -0.45
BdnfP21237 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
BdnfP21237 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.23□□□□□ -0.45
BdnfP21237 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.23□□□□□ -0.45
BdnfP21237 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
BdnfP21237 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.22□□□□□ -0.45
BdnfP21237 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
BdnfP21237 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.22□□□□□ -0.45
BdnfP21237 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.22□□□□□ -0.45
BdnfP21237 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Gm7488-201ENSMUST00000117148 684 ntBASIC12.22□□□□□ -0.45
BdnfP21237 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.22□□□□□ -0.45
BdnfP21237 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.22□□□□□ -0.45
BdnfP21237 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.22□□□□□ -0.45
BdnfP21237 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
BdnfP21237 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
BdnfP21237 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
BdnfP21237 Daam2-202ENSMUST00000224595 1926 ntBASIC12.21□□□□□ -0.45
BdnfP21237 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BdnfP21237 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BdnfP21237 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
BdnfP21237 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms