Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxb9P20615 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxb9P20615 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.17□□□□□ -0.46
Hoxb9P20615 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.17□□□□□ -0.46
Hoxb9P20615 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxb9P20615 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxb9P20615 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxb9P20615 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxb9P20615 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.17□□□□□ -0.46
Hoxb9P20615 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxb9P20615 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxb9P20615 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxb9P20615 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm13492-201ENSMUST00000119772 665 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.16□□□□□ -0.46
Hoxb9P20615 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxb9P20615 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxb9P20615 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms