Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm6082-201ENSMUST00000215204 454 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.23□□□□□ -0.45
Msx1P13297 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Gm8227-201ENSMUST00000223306 571 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Msx1P13297 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.23□□□□□ -0.45
Msx1P13297 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Msx1P13297 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.23□□□□□ -0.45
Msx1P13297 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Msx1P13297 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Msx1P13297 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Msx1P13297 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Msx1P13297 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Msx1P13297 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.22□□□□□ -0.45
Msx1P13297 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.22□□□□□ -0.45
Msx1P13297 Gm15370-201ENSMUST00000117158 253 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Gm6447-201ENSMUST00000118905 835 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Gm25668-201ENSMUST00000157700 129 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.22□□□□□ -0.45
Msx1P13297 Gm37489-201ENSMUST00000191883 159 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Gm6621-201ENSMUST00000193251 772 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Msx1P13297 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.22□□□□□ -0.45
Msx1P13297 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Msx1P13297 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Msx1P13297 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Msx1P13297 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Msx1P13297 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
Msx1P13297 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.21□□□□□ -0.45
Msx1P13297 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Msx1P13297 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Msx1P13297 Gm12372-201ENSMUST00000121654 768 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.21□□□□□ -0.45
Msx1P13297 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.21□□□□□ -0.45
Msx1P13297 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Gm19931-201ENSMUST00000198920 368 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Gm45276-201ENSMUST00000209549 1086 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Gm7439-201ENSMUST00000214053 835 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Nsd1-205ENSMUST00000224693 852 ntBASIC12.21□□□□□ -0.45
Msx1P13297 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.21□□□□□ -0.45
Msx1P13297 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Msx1P13297 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms