Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.35□□□□□ -0.59
P06344 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.35□□□□□ -0.59
P06344 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Mir1247-201ENSMUST00000116706 82 ntBASIC11.35□□□□□ -0.59
P06344 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Gm13786-201ENSMUST00000122371 333 ntBASIC11.35□□□□□ -0.59
P06344 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.35□□□□□ -0.59
P06344 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06344 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.35□□□□□ -0.59
P06344 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.35□□□□□ -0.59
P06344 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.35□□□□□ -0.59
P06344 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.35□□□□□ -0.59
P06344 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.35□□□□□ -0.59
P06344 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06344 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06344 Gm18935-201ENSMUST00000212692 664 ntBASIC11.35□□□□□ -0.59
P06344 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.35□□□□□ -0.59
P06344 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P06344 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.35□□□□□ -0.59
P06344 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P06344 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P06344 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.35□□□□□ -0.59
P06344 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
P06344 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P06344 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
P06344 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P06344 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.34□□□□□ -0.59
P06344 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
P06344 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
P06344 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Gm12502-201ENSMUST00000120197 444 ntBASIC11.34□□□□□ -0.59
P06344 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.34□□□□□ -0.59
P06344 Gm38266-201ENSMUST00000194931 421 ntBASIC11.34□□□□□ -0.59
P06344 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.34□□□□□ -0.59
P06344 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.34□□□□□ -0.59
P06344 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.34□□□□□ -0.59
P06344 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
P06344 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Pck2-205ENSMUST00000226352 2784 ntBASIC11.34□□□□□ -0.59
P06344 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
P06344 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P06344 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P06344 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms