Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PrnpP04925 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.15□□□□□ -0.3
PrnpP04925 AY036118-201ENSMUST00000200021 923 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Gm44100-201ENSMUST00000204329 436 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.15□□□□□ -0.3
PrnpP04925 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.15□□□□□ -0.3
PrnpP04925 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
PrnpP04925 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PrnpP04925 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PrnpP04925 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PrnpP04925 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
PrnpP04925 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Gm12616-201ENSMUST00000118594 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PrnpP04925 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Gm18734-201ENSMUST00000172937 808 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12624-201ENSMUST00000177615 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12621-201ENSMUST00000177760 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12615-201ENSMUST00000177970 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12622-201ENSMUST00000177975 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12627-201ENSMUST00000178412 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12625-201ENSMUST00000179122 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12614-201ENSMUST00000179586 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm12613-201ENSMUST00000180323 382 ntBASIC13.14□□□□□ -0.31
PrnpP04925 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 AU022133-201ENSMUST00000200601 873 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.14□□□□□ -0.31
PrnpP04925 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
PrnpP04925 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
PrnpP04925 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.14□□□□□ -0.31
PrnpP04925 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.14□□□□□ -0.31
PrnpP04925 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PrnpP04925 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.13□□□□□ -0.31
PrnpP04925 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.13□□□□□ -0.31
PrnpP04925 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.13□□□□□ -0.31
PrnpP04925 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Gm7848-201ENSMUST00000210739 718 ntBASIC13.13□□□□□ -0.31
PrnpP04925 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.13□□□□□ -0.31
PrnpP04925 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.13□□□□□ -0.31
PrnpP04925 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
PrnpP04925 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
PrnpP04925 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms