Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hoxa3P02831 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.69□□□□□ -0.7
Hoxa3P02831 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm17208-201ENSMUST00000168388 535 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm43822-201ENSMUST00000200285 476 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Hoxa3P02831 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.69□□□□□ -0.7
Hoxa3P02831 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.69□□□□□ -0.7
Hoxa3P02831 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hoxa3P02831 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm28386-201ENSMUST00000189147 1849 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm38266-201ENSMUST00000194931 421 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm43758-201ENSMUST00000199500 367 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm45865-201ENSMUST00000211815 945 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm10608-202ENSMUST00000213924 676 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm9257-201ENSMUST00000221254 232 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm24526-201ENSMUST00000082921 158 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Hoxa3P02831 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.68□□□□□ -0.7
Hoxa3P02831 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hoxa3P02831 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms