Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Mir5132-201ENSMUST00000175166 71 ntBASIC13.76□□□□□ -0.21
Vti1aO89116 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Gm26956-201ENSMUST00000182176 986 ntBASIC13.76□□□□□ -0.21
Vti1aO89116 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.76□□□□□ -0.21
Vti1aO89116 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.76□□□□□ -0.21
Vti1aO89116 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1aO89116 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1aO89116 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.75□□□□□ -0.21
Vti1aO89116 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Vti1aO89116 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vti1aO89116 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Vti1aO89116 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.75□□□□□ -0.21
Vti1aO89116 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vti1aO89116 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
Vti1aO89116 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Vti1aO89116 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Vti1aO89116 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Gm11222-201ENSMUST00000119005 738 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.75□□□□□ -0.21
Vti1aO89116 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 Gm26461-201ENSMUST00000175064 290 ntBASIC13.75□□□□□ -0.21
Vti1aO89116 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Vti1aO89116 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vti1aO89116 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.75□□□□□ -0.21
Vti1aO89116 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vti1aO89116 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1aO89116 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Gm11964-201ENSMUST00000120982 444 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 Gm24548-201ENSMUST00000158650 108 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1aO89116 Gm18753-201ENSMUST00000201000 566 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.74□□□□□ -0.21
Vti1aO89116 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.74□□□□□ -0.21
Vti1aO89116 Gm5904-201ENSMUST00000210286 865 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms