Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.54□□□□□ -0.56
Rnf13O54965 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Rnf13O54965 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rnf13O54965 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.53□□□□□ -0.56
Rnf13O54965 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm14350-201ENSMUST00000116642 640 ntBASIC11.53□□□□□ -0.56
Rnf13O54965 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Rnf13O54965 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf13O54965 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm6458-201ENSMUST00000211573 635 ntBASIC11.53□□□□□ -0.56
Rnf13O54965 Gm19220-201ENSMUST00000222682 803 ntBASIC11.53□□□□□ -0.56
Rnf13O54965 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.53□□□□□ -0.56
Rnf13O54965 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf13O54965 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf13O54965 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rnf13O54965 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf13O54965 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.52□□□□□ -0.56
Rnf13O54965 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.52□□□□□ -0.57
Rnf13O54965 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm16202-201ENSMUST00000117532 544 ntBASIC11.52□□□□□ -0.57
Rnf13O54965 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.52□□□□□ -0.57
Rnf13O54965 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.52□□□□□ -0.57
Rnf13O54965 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.52□□□□□ -0.57
Rnf13O54965 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.52□□□□□ -0.57
Rnf13O54965 Daam2-202ENSMUST00000224595 1926 ntBASIC11.52□□□□□ -0.57
Rnf13O54965 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rnf13O54965 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf13O54965 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms