Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarce1O54941 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Smarce1O54941 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Gm14704-201ENSMUST00000120300 874 ntBASIC15.11■□□□□ 0.01
Smarce1O54941 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Smarce1O54941 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarce1O54941 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.11■□□□□ 0.01
Smarce1O54941 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarce1O54941 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarce1O54941 Gm8099-201ENSMUST00000200510 742 ntBASIC15.11■□□□□ 0.01
Smarce1O54941 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarce1O54941 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarce1O54941 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarce1O54941 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarce1O54941 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarce1O54941 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarce1O54941 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarce1O54941 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarce1O54941 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarce1O54941 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.1■□□□□ 0.01
Smarce1O54941 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Gm13612-201ENSMUST00000119276 390 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Smarce1O54941 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarce1O54941 Gm23363-201ENSMUST00000175024 79 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Gm27437-201ENSMUST00000183429 107 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Gm27701-201ENSMUST00000184498 110 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.1■□□□□ 0.01
Smarce1O54941 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarce1O54941 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarce1O54941 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.1■□□□□ 0.01
Smarce1O54941 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.1■□□□□ 0.01
Smarce1O54941 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarce1O54941 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarce1O54941 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.09■□□□□ 0.01
Smarce1O54941 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Smarce1O54941 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC15.09■□□□□ 0.01
Smarce1O54941 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarce1O54941 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Smarce1O54941 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smarce1O54941 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.09■□□□□ 0.01
Smarce1O54941 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms