Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmgb3O54879 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmgb3O54879 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmgb3O54879 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hmgb3O54879 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm25287-201ENSMUST00000103846 110 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm22918-201ENSMUST00000103855 110 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Mir1895-201ENSMUST00000122615 79 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm44335-201ENSMUST00000196879 141 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm44297-201ENSMUST00000198304 141 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm44346-201ENSMUST00000198851 141 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hmgb3O54879 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.51□□□□□ -0.73
Hmgb3O54879 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hmgb3O54879 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.51□□□□□ -0.73
Hmgb3O54879 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm11779-201ENSMUST00000118541 368 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm15467-201ENSMUST00000120582 445 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm24158-201ENSMUST00000175263 71 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm5779-201ENSMUST00000218467 910 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.5□□□□□ -0.73
Hmgb3O54879 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hmgb3O54879 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Hmgb3O54879 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hmgb3O54879 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms