Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Atf6bO35451 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.09□□□□□ -0.63
Atf6bO35451 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Atf6bO35451 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm14660-201ENSMUST00000119809 575 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.09□□□□□ -0.63
Atf6bO35451 Mir1982-201ENSMUST00000157368 74 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm27731-201ENSMUST00000185192 107 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm19931-201ENSMUST00000198920 368 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.09□□□□□ -0.63
Atf6bO35451 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Atf6bO35451 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Atf6bO35451 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Atf6bO35451 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.08□□□□□ -0.63
Atf6bO35451 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Atf6bO35451 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.08□□□□□ -0.64
Atf6bO35451 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.08□□□□□ -0.64
Atf6bO35451 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.08□□□□□ -0.64
Atf6bO35451 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.08□□□□□ -0.64
Atf6bO35451 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6bO35451 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.08□□□□□ -0.64
Atf6bO35451 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.08□□□□□ -0.64
Atf6bO35451 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Atf6bO35451 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.08□□□□□ -0.64
Atf6bO35451 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Atf6bO35451 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms