Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Alx4O35137 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.36□□□□□ -0.59
Alx4O35137 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.36□□□□□ -0.59
Alx4O35137 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Gm42612-201ENSMUST00000197986 623 ntBASIC11.36□□□□□ -0.59
Alx4O35137 Gm43170-201ENSMUST00000199827 612 ntBASIC11.36□□□□□ -0.59
Alx4O35137 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.36□□□□□ -0.59
Alx4O35137 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.36□□□□□ -0.59
Alx4O35137 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.36□□□□□ -0.59
Alx4O35137 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Alx4O35137 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.35□□□□□ -0.59
Alx4O35137 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Syt7-204ENSMUST00000223586 1344 ntBASIC11.35□□□□□ -0.59
Alx4O35137 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Alx4O35137 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Alx4O35137 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.35□□□□□ -0.59
Alx4O35137 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Gm42599-201ENSMUST00000201308 469 ntBASIC11.35□□□□□ -0.59
Alx4O35137 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.35□□□□□ -0.59
Alx4O35137 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Alx4O35137 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.35□□□□□ -0.59
Alx4O35137 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Alx4O35137 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms