Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkx1-1G3UXB3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm12598-201ENSMUST00000117333 830 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm4342-201ENSMUST00000118982 367 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm12502-201ENSMUST00000120197 444 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm12363-201ENSMUST00000122250 668 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm15795-201ENSMUST00000160969 553 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Mir6923-201ENSMUST00000184592 72 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm43916-201ENSMUST00000205062 967 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm33242-201ENSMUST00000212130 1057 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm22977-201ENSMUST00000082615 107 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm23448-201ENSMUST00000083151 104 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkx1-1G3UXB3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm13600-201ENSMUST00000117949 744 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm14610-201ENSMUST00000118358 966 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm11389-201ENSMUST00000121407 430 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm12628-201ENSMUST00000122193 382 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Zfp978-202ENSMUST00000154154 1250 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm17391-201ENSMUST00000171036 126 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm2546-201ENSMUST00000182630 991 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm29576-201ENSMUST00000188020 678 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm8885-201ENSMUST00000189382 598 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm28354-201ENSMUST00000190904 678 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm45550-201ENSMUST00000209380 946 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Gm17330-201ENSMUST00000221047 165 ntBASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkx1-1G3UXB3 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms