Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm25043-201ENSMUST00000158604 212 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhb9E9Q5G2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm14726-201ENSMUST00000120623 896 ntBASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm39404-201ENSMUST00000216350 313 ntBASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhb9E9Q5G2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Gm12314-201ENSMUST00000118104 538 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Gm14760-201ENSMUST00000121831 999 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Rmrp-201ENSMUST00000157463 271 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Gm26956-201ENSMUST00000182176 986 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Gm37201-201ENSMUST00000191845 523 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhb9E9Q5G2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.92□□□□□ -0.02
Pcdhb9E9Q5G2 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms