Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm14760-201ENSMUST00000121831 999 ntBASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm23045-201ENSMUST00000175041 96 ntBASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm27910-201ENSMUST00000185004 107 ntBASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm19166-201ENSMUST00000196041 1063 ntBASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hfm1D3Z4R1 Gm11949-201ENSMUST00000117640 372 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm12164-201ENSMUST00000121695 551 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm44329-201ENSMUST00000197469 112 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm9797-202ENSMUST00000218003 294 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm13384-201ENSMUST00000117166 1344 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm12579-201ENSMUST00000118040 783 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm23218-201ENSMUST00000158124 276 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm6485-201ENSMUST00000160676 439 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm28388-201ENSMUST00000186262 437 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm42518-201ENSMUST00000196277 938 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Gm9873-201ENSMUST00000063891 1097 ntBASIC17.55■□□□□ 0.4
Hfm1D3Z4R1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm11663-201ENSMUST00000117888 290 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm21092-201ENSMUST00000178995 955 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm28686-201ENSMUST00000187404 609 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Gm5705-201ENSMUST00000066241 711 ntBASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hfm1D3Z4R1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm3765-201ENSMUST00000130985 1447 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms