Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Scn7aB1AYL1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.03■□□□□ 0.16
Scn7aB1AYL1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Scn7aB1AYL1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm37905-201ENSMUST00000195310 341 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm7600-201ENSMUST00000209657 785 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm10752-201ENSMUST00000218348 729 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Gm44260-201ENSMUST00000204946 2094 ntBASIC16.02■□□□□ 0.16
Scn7aB1AYL1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm12899-201ENSMUST00000120565 551 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm8815-201ENSMUST00000173809 620 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm5706-201ENSMUST00000181525 993 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm29499-201ENSMUST00000189151 486 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm28329-201ENSMUST00000191208 689 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm29171-201ENSMUST00000191397 486 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 CT485607.1-201ENSMUST00000216100 85 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 AC166344.1-201ENSMUST00000223745 674 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Scn7aB1AYL1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn7aB1AYL1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms