Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gm13612-201ENSMUST00000119276 390 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gm8515-201ENSMUST00000194852 576 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc194A0A140LIT1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc194A0A140LIT1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc194A0A140LIT1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Mir339-201ENSMUST00000083659 96 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms