Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chaf1aQ9QWF0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gm15429-201ENSMUST00000151268 798 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Mir6392-201ENSMUST00000184924 108 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Mir7654-201ENSMUST00000185082 70 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Chaf1aQ9QWF0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Chaf1aQ9QWF0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Gm15371-201ENSMUST00000117057 784 ntBASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Gm11978-201ENSMUST00000122315 466 ntBASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.28□□□□□ -0.12
Chaf1aQ9QWF0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms