Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm6222-201ENSMUST00000120787 396 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm37714-201ENSMUST00000194742 342 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm18165-201ENSMUST00000217426 928 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Mir497b-201ENSMUST00000093601 125 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trem1Q9JKE2 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm2810-201ENSMUST00000118681 990 ntBASIC11.38□□□□□ -0.59
Trem1Q9JKE2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm11025-201ENSMUST00000140773 466 ntBASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trem1Q9JKE2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm38225-201ENSMUST00000194001 393 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 AA619741-201ENSMUST00000195095 646 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms