Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb3Q9ERD7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tubb3Q9ERD7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.69□□□□□ -0.38
Tubb3Q9ERD7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Tubb3Q9ERD7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Tubb3Q9ERD7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubb3Q9ERD7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubb3Q9ERD7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubb3Q9ERD7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms