Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cdc40Q9DC48 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm8805-201ENSMUST00000117848 313 ntBASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm27516-201ENSMUST00000184237 98 ntBASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdc40Q9DC48 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gm13123-201ENSMUST00000122173 492 ntBASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gm38266-201ENSMUST00000194931 421 ntBASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cdc40Q9DC48 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdc40Q9DC48 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdc40Q9DC48 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdc40Q9DC48 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdc40Q9DC48 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdc40Q9DC48 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms