Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3a3Q9D554 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm43125-201ENSMUST00000201724 730 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3a3Q9D554 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gm10766-202ENSMUST00000194123 606 ntBASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Sf3a3Q9D554 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.86□□□□□ -0.35
Sf3a3Q9D554 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms