Protein–RNA interactions for Protein: Q9CZB3

Thumpd2, THUMP domain-containing protein 2, mousemouse

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd2Q9CZB3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Gm5356-201ENSMUST00000093326 615 ntBASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.38□□□□□ -0.27
Thumpd2Q9CZB3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Mir1894-201ENSMUST00000122802 81 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Thumpd2Q9CZB3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm11424-201ENSMUST00000121929 829 ntBASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Thumpd2Q9CZB3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd2Q9CZB3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd2Q9CZB3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd2Q9CZB3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Thumpd2Q9CZB3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.35□□□□□ -0.27
Thumpd2Q9CZB3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms