Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hdhd3Q9CYW4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hdhd3Q9CYW4 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hdhd3Q9CYW4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms