Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm12260-201ENSMUST00000122447 411 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm44124-201ENSMUST00000204159 472 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
RTRAFQ9CQE8 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Gm13015-201ENSMUST00000118674 204 ntBASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 AC131710.1-201ENSMUST00000228336 990 ntBASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
RTRAFQ9CQE8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm11745-201ENSMUST00000121669 448 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm18206-201ENSMUST00000207027 926 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.33□□□□□ -0.76
RTRAFQ9CQE8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms