Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm11814-201ENSMUST00000119515 929 ntBASIC12.49□□□□□ -0.41
Trim16Q99PP9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Proscos-202ENSMUST00000178990 666 ntBASIC12.49□□□□□ -0.41
Trim16Q99PP9 Gm8652-201ENSMUST00000181363 964 ntBASIC12.49□□□□□ -0.41
Trim16Q99PP9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.49□□□□□ -0.41
Trim16Q99PP9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.49□□□□□ -0.41
Trim16Q99PP9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim16Q99PP9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Mir7221-201ENSMUST00000184009 72 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.48□□□□□ -0.41
Trim16Q99PP9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trim16Q99PP9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms