Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm14350-201ENSMUST00000116642 640 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm7488-201ENSMUST00000117148 684 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Trim8Q99PJ2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gm37057-201ENSMUST00000192624 1916 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Gm6218-201ENSMUST00000219812 628 ntBASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim8Q99PJ2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.49□□□□□ -0.41
Trim8Q99PJ2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim8Q99PJ2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms