Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
SncaipQ99ME3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.18□□□□□ -0.3
SncaipQ99ME3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.18□□□□□ -0.3
SncaipQ99ME3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.18□□□□□ -0.3
SncaipQ99ME3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SncaipQ99ME3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.17□□□□□ -0.3
SncaipQ99ME3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SncaipQ99ME3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Mir1982-201ENSMUST00000157368 74 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.16□□□□□ -0.3
SncaipQ99ME3 AY702102-202ENSMUST00000194651 1173 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.16□□□□□ -0.3
SncaipQ99ME3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SncaipQ99ME3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms