Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm8652-201ENSMUST00000181363 964 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Vmp1Q99KU0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Vmp1Q99KU0 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm13829-201ENSMUST00000119600 138 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm27847-201ENSMUST00000183711 107 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm27375-201ENSMUST00000183799 107 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm6266-201ENSMUST00000203844 806 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vmp1Q99KU0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.32□□□□□ -0.44
Vmp1Q99KU0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms