Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhb1Q91Y08 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Gm1335-201ENSMUST00000121653 386 ntBASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Gm8602-201ENSMUST00000184045 607 ntBASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhb1Q91Y08 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gm25857-201ENSMUST00000082788 129 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb1Q91Y08 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gm15703-201ENSMUST00000120250 880 ntBASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gm38092-201ENSMUST00000195600 653 ntBASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms