Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm6266-201ENSMUST00000203844 806 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Gm44809-201ENSMUST00000208305 993 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 AC122305.2-201ENSMUST00000215148 834 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb20Q91XZ9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14083-201ENSMUST00000117873 620 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm14388-201ENSMUST00000118119 477 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm11446-201ENSMUST00000121319 866 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm42698-201ENSMUST00000197790 762 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 AC167202.1-201ENSMUST00000219027 331 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 AC123738.1-201ENSMUST00000224796 773 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm10012-201ENSMUST00000078252 192 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb20Q91XZ9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 AC091783.1-201ENSMUST00000223614 1613 ntBASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdhb20Q91XZ9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms