Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usb1Q91W78 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Usb1Q91W78 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.66□□□□□ -0.38
Usb1Q91W78 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.66□□□□□ -0.38
Usb1Q91W78 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Usb1Q91W78 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Usb1Q91W78 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.65□□□□□ -0.38
Usb1Q91W78 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.65□□□□□ -0.38
Usb1Q91W78 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Gm17420-201ENSMUST00000164753 153 ntBASIC12.65□□□□□ -0.38
Usb1Q91W78 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.65□□□□□ -0.38
Usb1Q91W78 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Usb1Q91W78 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usb1Q91W78 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Usb1Q91W78 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Usb1Q91W78 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.64□□□□□ -0.39
Usb1Q91W78 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.64□□□□□ -0.39
Usb1Q91W78 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Gm16202-201ENSMUST00000117532 544 ntBASIC12.64□□□□□ -0.39
Usb1Q91W78 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.64□□□□□ -0.39
Usb1Q91W78 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.64□□□□□ -0.39
Usb1Q91W78 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Usb1Q91W78 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Usb1Q91W78 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Usb1Q91W78 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.63□□□□□ -0.39
Usb1Q91W78 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.63□□□□□ -0.39
Usb1Q91W78 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Usb1Q91W78 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms