Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Nup35Q8R4R6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup35Q8R4R6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Nup35Q8R4R6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup35Q8R4R6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm12291-201ENSMUST00000121627 311 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm6458-201ENSMUST00000211573 635 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm9797-201ENSMUST00000052902 613 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gm20445-201ENSMUST00000061905 565 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup35Q8R4R6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms