Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm13689-201ENSMUST00000119360 685 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Daam2-202ENSMUST00000224595 1926 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gm11978-201ENSMUST00000122315 466 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Gm38223-201ENSMUST00000194484 695 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc87Q8CDL9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ccdc87Q8CDL9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms