Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm22323-201ENSMUST00000103832 109 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm14723-201ENSMUST00000118686 215 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm27243-201ENSMUST00000183964 521 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm37201-201ENSMUST00000191845 523 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm43758-201ENSMUST00000199500 367 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm3961-201ENSMUST00000204425 994 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm10076-201ENSMUST00000073238 384 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alx1Q8C8B0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx1Q8C8B0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alx1Q8C8B0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Alx1Q8C8B0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.83□□□□□ -0.04
Alx1Q8C8B0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gm24136-201ENSMUST00000083374 165 ntBASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alx1Q8C8B0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm14726-201ENSMUST00000120623 896 ntBASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm14999-201ENSMUST00000121039 624 ntBASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm13570-201ENSMUST00000140763 309 ntBASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm23119-201ENSMUST00000158610 140 ntBASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alx1Q8C8B0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms