Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trub1Q8C0D0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trub1Q8C0D0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trub1Q8C0D0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trub1Q8C0D0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trub1Q8C0D0 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trub1Q8C0D0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
Trub1Q8C0D0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Gm6266-201ENSMUST00000203844 806 ntBASIC13.14□□□□□ -0.31
Trub1Q8C0D0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.14□□□□□ -0.31
Trub1Q8C0D0 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trub1Q8C0D0 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm15703-201ENSMUST00000120250 880 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm40466-201ENSMUST00000212174 422 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.13□□□□□ -0.31
Trub1Q8C0D0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trub1Q8C0D0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms