Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm26035-201ENSMUST00000083065 308 ntBASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Daam2-202ENSMUST00000224595 1926 ntBASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cdhr3Q8BL00 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm15920-201ENSMUST00000118998 402 ntBASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdhr3Q8BL00 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Gm14057-201ENSMUST00000120631 482 ntBASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Gm18624-201ENSMUST00000220966 658 ntBASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdhr3Q8BL00 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms