Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Clrn3Q8BHH8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.02□□□□□ -0.48
Clrn3Q8BHH8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm11424-201ENSMUST00000121929 829 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn3Q8BHH8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm11803-201ENSMUST00000119966 444 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm11637-201ENSMUST00000120601 592 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn3Q8BHH8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms